MEDICAL DECISION SUPPORT SYSTEM FOR CANCER DIAGNOSIS
USING CLINICAL AND GENOMIC DATA

 

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This research project aimed to the development of a novel medical decision support system for cancer diagnosis, using clinical and DNA patient data. The proposed system consists of two autonomous subsystems. Their outputs may be combined for the final diagnosis. The first subsystem uses endoscopic video as input. It provides information regarding the existence and the location of lesions. The research was focusing to the development of novel methods for video analysis, real-time feature extraction, selection and classification. The second subsystem uses DNA microarray data as input. Microarray data processing determine the genes of which the expression is differentiated in the presence of cancer. The research was focusing in data preprocessing, feature selection and cancer identification and/or prediction methods. Time consuming data processing algorithms have been implemented in Field Programmable Gate Arrays (FPGA), to achieve realtime performance.  Medical and biological evaluation of the system’s results have been realized. The results of this research could be proved valuable for disease diagnosis and prediction and could be used for the determination of new pharmaceutical targets in the future.


This work was realized under the framework of the Operational Program for Education and Vocational Training Project “Pythagoras” co-funded by European Union and the Ministry of National Education and Religious Affairs of Greece.

 

 

Realtime Systems & Image Analysis Laboratory, Department of Informatics and Telecommunications, University of Athens, Greece